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From DrCoke at MangaHelpers:
He has never been the type to stand out in the class. Kurihara Yuzuru has lived life by avoiding entering the lives of others, staying to himself. The story begins where he has to go to a whole new school, which means new classmates. He lacks any confidence to make new friends, so the fear of rejection drives him into a wish he never thought he would make. This single wish leads to a first day of class he would never forget. Yuzuru will have to make choices that will significantly alter others' lives, choices he could never make in the past.

When a mysterious so-called meteorite crashes, a group of students gather to go and investigate it as part of their club activity. Low and behold, the meteorite is actually a futuristic, high-tech supermarket! What comes after is only weirder and weirder as they encounter more things that are out of this world. Follow these students as they go on supernatural adventures!

Hanpeita Takeichi, a samurai, finds that he has travelled through time to modern-day Japan. He's taken in by an old man who runs a cram school, and begins to work as a teacher there.

In a world driven by fictionalized friendship, courtesy of the program named "Real Account", the table suddenly turns, and the cybernetic world turns real! How will they survive?

Note: So... This manga is technically a two part... the first 10 chapters are part 1 and the 11 onward is part 2. In the past it's been split up into two series(Real Account & Real Account II).

From Fujoshi Bitches and Hoshikuzuu Scans:

Corporate spy, Makino has slipped into the company, Prad as a temporary worker. But he is then discovered by prospective CEO, Kamina. Ever since then, he is being forced to live at Kamina's place?

Instead of punishment, what awaits? A mature love story brought to you by Fujitani Youko. Who will emerge as the winner in this showdown?

30 year-old Odu is feeling left out. His friends are slowly marrying off and with his tiny salary as a video store clerk, he can't afford to go on trips with them when they can all hang out. Oh, and just to top it all off, his popular friend Araragi just found out Odu's most embarrassing secret... Odu's still a virgin at 30, but maybe it's not so bad after all because Araragi's never been with a girl either?

A beautiful and mature sixth grade girl from Tokyo suddenly has to move out to the country side of Japan with her family. The girl, Natsume, then meets a boy and from then on she begins to feel 'something' in her body, like a surging wave.

Yuuki Tsumire was raised by her single mother, who always told her to keep smiling, no matter what hardships she endured. The two of them were a family, until Tsumire's mother died from illness.
Tsumire soon learned that she had a family she knew nothing about: a cold, rich family that disowned her kindhearted mother when she became pregnant. Tsumire now must go live with this family, even though none of them seem to want her there. She doesn't have to switch schools, so she at least has her friends to help her through this difficult time. However, she doesn't have the heart to confide in her friends with even more problems, so she tries to keep it bottled up inside.
To her surprise, the Yuuki family lawyer, a young man named Hino, soon becomes her emotional support in this difficult situation. However, Tsumire's reactions to him might mean that she wishes he were something more.

Original Korean Webcomic http://www.lezhin.com/comic/masterofdream

From MangaHelpers:

There is a hidden island that is a mecca for martial artists. There are different reasons people go there--because they want to become amazing at their art, or simply because they come from a family known for martial arts and they are sent there by their parents. In any case, new arrivals sign a contract that they can't leave for 10 years, and that contract is strictly enforced. Within the complex, there is a forbidden area...

Ro is a new arrival, and he was hoping to hone his skills. However, it seems to him that he's gaining nothing, and is just being required to drag himself down to the level of his inferior peers. One day, he opens the door in the forbidden area, and finds a boy who had been trapped there for ten years. The boy remembers little of his life before, and Ro names him "Kid." Kid is determined to leave the complex and search for his father. Maybe if Kid can get help from Ro and other new friends he makes, such as a sad, bullied young girl named Mugi, he will be able to begin his search! [tethysdust]

From Agent of Change Translations:

Sasakura Hakka, 14 years old.
One day, when I got home a strange creature in a Kigurumi suit, Ginger, was standing there!
It seems like Hakka has been chosen to rise with her comrades as, Guardians, to protect this world from the evil invaders of a different dimension, but...
The Kigurumi suited creatures have suddenly transformed into gorgeous male eye candies!? A heart-pounding, action packed Kigurumi Adventure!!

After the end of the One Year War, a man named Led Wayline was recruited to serve in the Federation Survey Service. One thing is though, Led has no idea who he was. But as the time passes by, he gets some dreams of his ties with a Zeon pilot named Johnny Ridden.

Centered around a girl who can control the greatest of beasts as if she was playing a musical instrument. However, she gets embroiled in a war for supremacy between kingdoms.

Lately in this neighborhood, there have been several sightings of a suspicious man around 40 years old. Several female students are being followed. If you see a suspicious man, run away immediately. As much as possible, make sure you are not alone.

From Evil Flowers:

They say the world is going to end in five days. Now what to do until then? Follow Fuji, Touko and Nitaka on their last school days preparing for the end of the world. Meanwhile, Niino, a clumsy devil, announces that she’s going to destroy the world in five days from now. The hilarious chaos is complete now.

A collection of strange horror stories in the vein of authors such as R.L. Stine, from the master of absurdist horror, Takahashi Yousuke.

From Horobosu Scanlations:

"Seriously, I'll finish you within three hours."

That's what Kirishima Haru had in mind when he entered the virtual world of a dating sim. Haru's had it all since childhood - looks, charisma, good grades, athletic talent and girls, but in this virtual world, Haru would meet the only thing he wants and unable to attain. At the edge of the incomplete world, the love story of a player and a NPC unfolds.

The story of a slave called Zion, set in a Middle Eastern land. He is training to be a great necromancer, capable of fighting on even ground with Knights, in order to have his long-awaited revenge as one of the four chosen children of Kronos. He became a slave of his own accord to achieve his goal. What has God chosen as his fate or was it chosen by the devil?

The collection of anthology from Are You Alice? by various authors. Part 1) The Mad Hatter's Magnificent Holiday by Inui Miku